Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880766.1_cds_XP_016437582.1_33328
CDS Infomation

[gene=LOC107763606] [db_xref=GeneID:107763606] [protein=nucleolar protein 56-like] [protein_id=XP_016437582.1] [location=join(8733..8937,9668..9882,10013..10170,10534..10721,10795..11047,11253..11401,11498..11632,12377..12711)] [gbkey=CDS]
Sequence

ATGGCGTTGTACCTCTTGTACGAGTCCGCGTCCGGGTACGCTCTGTTCTTGGCACATGGG
CTTGACGAAATCGGCCAGAACACTGAGGCAGTTCGAAACTCAGTTACCGATCTCAACCGC
TTTGGGAAAATCTTAAAACTTGCTGCTTTTAGTCCATTTGAATCTGCTCTTGATGCCCTT
AACCAATGCAATGCTGTCTCTGAAGGGCAAATGACTGATGAGCTAAGGAACTTTTTGGAG
CTTACTCTCCCAAAAGTTAAGGAGGGTAAGAAGCCGAAGTTCAGCCTAGGATTGGCAGAG
CCTAAGCTCGGGTCACATATTCATGAAGTGACTAAGTTTCCCTGCCAAAGCAATGAGTTT
GTTCTTGAACTTTTACGTGGAGTGCGCTTGCATTTTGACAAGTTCATTGAAAACCTAAAG
TCTGGTGACCTGGAGAAAGCCCAACTTGGCCTGAGTCACAGTTACAGCAGAGCAAAGGTT
AAGTTCAACGTCAATCGTGTTGACAATATGGTTACTCAGGCTATTGTCCTTCTTGATACT
CTTGACAAAGATATAAATACCTTTGCAATGAGAGTCAGAGAATGGTACTCATGGCATTTC
CCAGAGTTAGTGAAGATTATCAATGACATTTATCTATATGCTAAAGTTGCAAAATTCGTT
GATGACAAATCCCAGTTGTCCGAAGACAAACTTGCCGACTTAACAGAAATAGTTGGAGAT
GAAGATAAAGCAAAAGAAATTGTAGAAGCTGCCAAAGCATCCATGGGCCAGGATTTGTCC
CCAGTTGACTTGATTAACGTCAAGTTATTTGCACAGAGAGTAATGGACCTTGTTGAATAC
AGGAAGAATCTTTATGATTATCTGGTCACTAAAATGCATGACATAGCACCAAATTTGGCT
GCTCTGATTGGTGAAATCGTTGGTGCCCGTTTAATTTCTCATGCTGGTAGTCTCACAAAT
CTGGCAAAGTGCCCCTCTTCTACCCTTCAGATCCTTGGTGCTGAGAAGGCACTTTTCAGA
GCCTTGAAAACCAAAGGGAATACACCAAAATATGGTCTCATATTTCATTCTTCCTTCATT
GGCCGTGCAACTGCTCGTAACAAGGGTCGGATGGCTCGTTTTCTTGCAAACAAGTGCTCT
ATTGCTTCTCGTCTTGACTGTTTCTTAGACAAAAGCACTACTGCTTTTGGAGAGAAACTC
CGCGAACAAGTTGAGGAGCGACTAGACTTTTATGACAAGGGGGTTGCACCTCGTAAAAAC
CTAGATGTAATGAAAGCTGCTATTGAAACGGCCGAAGACAAAGACATGGATGTTGATGAG
GCAGCTAATGAAGCTTCGACAAAGAAAAGCAAGAAAAAGAAATCGAAAGCTGAGATAACA
GAAGGTGGACAACCAATGGATGAGGATAAACCATTTGTTGATAGAAATGGTGATGCCTCT
GAAGAGCCCAAATCCGAAAAGAAAAAGAAGAAGCATGAAGAGGATCAGACTGCAGGTAAT
GGGAACGGTATGAGTGAGGATGGAACAGCAAAGAAGAAGAAAAAGAAGAAGAGTAAGGAA
GAAAATGGAGAGGAACTCCCTGCTGCAAGTGAAGGTAAAAAGAAAAAGAAGAAGTCCAAG
GCTCAAGATGATGAATAA

Peptide Sequence

PEP ID

XP_016437582.1
PEP Infomation

PREDICTED: nucleolar protein 56-like [Nicotiana tabacum]
Sequence

MALYLLYESASGYALFLAHGLDEIGQNTEAVRNSVTDLNRFGKILKLAAFSPFESALDAL
NQCNAVSEGQMTDELRNFLELTLPKVKEGKKPKFSLGLAEPKLGSHIHEVTKFPCQSNEF
VLELLRGVRLHFDKFIENLKSGDLEKAQLGLSHSYSRAKVKFNVNRVDNMVTQAIVLLDT
LDKDINTFAMRVREWYSWHFPELVKIINDIYLYAKVAKFVDDKSQLSEDKLADLTEIVGD
EDKAKEIVEAAKASMGQDLSPVDLINVKLFAQRVMDLVEYRKNLYDYLVTKMHDIAPNLA
ALIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFI
GRATARNKGRMARFLANKCSIASRLDCFLDKSTTAFGEKLREQVEERLDFYDKGVAPRKN
LDVMKAAIETAEDKDMDVDEAANEASTKKSKKKKSKAEITEGGQPMDEDKPFVDRNGDAS
EEPKSEKKKKKHEEDQTAGNGNGMSEDGTAKKKKKKKSKEENGEELPAASEGKKKKKKSK
AQDDE

Transcript Sequence

Gene sequence data has not been registered.